Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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|
+ | R | → |
|
+ | null |
ER | Cis- | Medial- | Trans- | TGN |
---|---|---|---|---|
|
|
|
|
|
UGT2A1/hsa-miR-6831-5p |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
---|---|---|---|---|---|---|---|---|
5'... AAAUUUUCUAUUUC
UCUACCU
G...
3' CUGGAGGAGGAGUGUG AGAUGGA U |
7mer-m8 | 131-137 | -0.298 | 96.0 | -0.298 | 97.0 | noncon | |
5'... AAAUUUUCUAUUUC
UCUACCU
G...
3' CUGGAGGAGGAGUGUG AGAUGGA U |
7mer-m8 | 131-137 | -0.199 | 87.0 | -0.199 | 91.0 | noncon | |
5'... CUGACACAAGGAUA
CUACCUA
A...
3' CUGGAGGAGGAGUGUGA GAUGGA U |
7mer-A1 | 270-276 | -0.183 | 85.0 | -0.183 | 90.0 | noncon | |
5'... CUGACACAAGGAUA
CUACCUA
A...
3' CUGGAGGAGGAGUGUGA GAUGGA U |
7mer-A1 | 270-276 | -0.175 | 84.0 | 0.0 | 13.0 | noncon |