Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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No reaction | → |
ER | Cis- | Medial- | Trans- | TGN |
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miRNA Name | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
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hsa-miR-6805-5p | 1648-1655 | -0.637 | 99.0 | -0.032 | 45.0 | noncon | |
hsa-miR-4758-3p | 300-307 | -0.616 | 99.0 | -0.186 | 91.0 | noncon | |
hsa-miR-4791 | 71-78 | -0.612 | 99.0 | -0.612 | 99.0 | noncon | |
hsa-miR-4278 | 1649-1656 | -0.569 | 98.0 | -0.029 | 39.0 | noncon | |
hsa-miR-633 | 246-253 | -0.56 | 99.0 | -0.486 | 99.0 | noncon | |
hsa-miR-1206 | 187-194 | -0.536 | 99.0 | -0.467 | 99.0 | noncon | |
hsa-miR-3201 | 71-78 | -0.528 | 99.0 | -0.528 | 99.0 | noncon | |
hsa-miR-1266-5p | 538-545 | -0.528 | 99.0 | -0.027 | 69.0 | noncon | |
hsa-miR-7852-3p | 67-74 | -0.526 | 99.0 | -0.526 | 99.0 | noncon | |
hsa-miR-455-5p | 304-311 | -0.501 | 99.0 | -0.155 | 89.0 | noncon | |
hsa-miR-1468-3p | 233-240 | -0.469 | 99.0 | -0.409 | 99.0 | noncon | |
hsa-miR-4518 | 538-545 | -0.455 | 99.0 | -0.024 | 77.0 | noncon | |
hsa-miR-5687 | 351-358 | -0.45 | 99.0 | -0.141 | 93.0 | noncon | |
hsa-miR-6726-5p | 727-734 | -0.446 | 98.0 | -0.024 | 42.0 | noncon | |
hsa-miR-4300 | 727-734 | -0.425 | 98.0 | -0.023 | 44.0 | noncon | |
hsa-miR-6846-5p | 1647-1653 | -0.425 | 95.0 | -0.023 | 28.0 | noncon | |
hsa-miR-6865-3p | 162-168 | -0.42 | 98.0 | -0.368 | 98.0 | noncon | |
hsa-miR-5591-5p | 727-734 | -0.409 | 97.0 | -0.022 | 41.0 | noncon | |
hsa-miR-6848-5p | 1647-1653 | -0.403 | 95.0 | -0.022 | 26.0 | noncon | |
hsa-miR-6761-5p | 1724-1731 | -0.402 | 99.0 | -0.02 | 65.0 | noncon | |
hsa-miR-6825-5p | 455-462 | -0.395 | 95.0 | -0.021 | 34.0 | noncon | |
hsa-miR-6776-3p | 165-171 | -0.394 | 99.0 | -0.346 | 98.0 | noncon | |
hsa-miR-548aw | 234-241 | -0.386 | 99.0 | -0.338 | 99.0 | noncon | |
hsa-miR-1233-5p | 1472-1479 | -0.384 | 97.0 | -0.021 | 40.0 | noncon | |
hsa-miR-3117-5p | 598-605 | -0.381 | 98.0 | -0.021 | 40.0 | noncon | |
hsa-miR-1227-3p | 114-120 | -0.379 | 97.0 | -0.379 | 98.0 | noncon | |
hsa-miR-448 | 360-367 | -0.379 | 98.0 | -0.121 | 89.0 | con | |
hsa-miR-4537 | 925-932 | -0.378 | 92.0 | -0.02 | 28.0 | noncon | |
hsa-miR-4999-5p | 79-85 | -0.376 | 96.0 | -0.376 | 97.0 | noncon | |
hsa-miR-6778-5p | 1472-1479 | -0.376 | 97.0 | -0.02 | 39.0 | noncon | |
hsa-miR-6770-5p | 479-486 | -0.375 | 98.0 | -0.02 | 60.0 | noncon | |
hsa-miR-4676-3p | 1715-1722 | -0.372 | 98.0 | -0.02 | 64.0 | noncon | |
hsa-miR-5692b | 257-264 | -0.37 | 99.0 | -0.223 | 99.0 | noncon | |
hsa-miR-5692c | 257-264 | -0.37 | 99.0 | -0.223 | 99.0 | noncon | |
hsa-miR-1825 | 117-123 | -0.368 | 98.0 | -0.368 | 98.0 | noncon | |
hsa-miR-508-3p | 1680-1687 | -0.366 | 98.0 | -0.02 | 42.0 | noncon | |
hsa-miR-4754 | 1398-1404 | -0.365 | 91.0 | -0.02 | 21.0 | noncon | |
hsa-miR-4719 | 387-394 | -0.357 | 99.0 | -0.114 | 95.0 | noncon | |
hsa-miR-892c-3p | 1715-1722 | -0.356 | 98.0 | -0.019 | 59.0 | noncon | |
hsa-miR-377-3p | 1343-1350 | -0.356 | 97.0 | -0.019 | 45.0 | noncon | |
hsa-miR-920 | 727-734 | -0.349 | 97.0 | -0.019 | 49.0 | noncon | |
hsa-miR-7641 | 1430-1437 | -0.347 | 98.0 | -0.019 | 67.0 | noncon | |
hsa-miR-3613-5p | 491-497 | -0.347 | 97.0 | -0.019 | 54.0 | noncon | |
hsa-miR-545-3p | 314-321 | -0.346 | 99.0 | -0.111 | 89.0 | noncon | |
hsa-miR-541-3p | 1003-1010 | -0.344 | 97.0 | -0.019 | 54.0 | noncon | |
hsa-miR-4715-3p | 113-119 | -0.334 | 98.0 | -0.334 | 99.0 | noncon | |
hsa-miR-4795-3p | 226-233 | -0.333 | 98.0 | -0.292 | 98.0 | noncon | |
hsa-miR-452-5p | 1715-1722 | -0.329 | 98.0 | -0.018 | 56.0 | noncon | |
hsa-miR-3941 | 1549-1556 | -0.323 | 98.0 | -0.018 | 68.0 | noncon | |
hsa-miR-3150a-3p | 456-463 | -0.318 | 96.0 | -0.018 | 48.0 | noncon | |
hsa-miR-6763-5p | 456-463 | -0.318 | 96.0 | -0.018 | 47.0 | noncon | |
hsa-miR-3936 | 1635-1641 | -0.314 | 97.0 | -0.017 | 38.0 | noncon | |
hsa-miR-4786-5p | 1661-1668 | -0.312 | 97.0 | -0.017 | 45.0 | noncon | |
hsa-miR-654-5p | 1003-1010 | -0.312 | 95.0 | -0.017 | 52.0 | noncon | |
hsa-miR-450a-1-3p | 1274-1281 | -0.309 | 98.0 | -0.017 | 52.0 | noncon | |
hsa-miR-32-3p | 276-283 | -0.309 | 99.0 | -0.1 | 97.0 | noncon | |
hsa-miR-3617-3p | 316-322 | -0.306 | 95.0 | -0.099 | 78.0 | noncon | |
hsa-miR-147a | 129-135 | -0.303 | 99.0 | -0.303 | 99.0 | noncon | |
hsa-miR-5579-5p | 1214-1221 | -0.302 | 96.0 | -0.017 | 55.0 | noncon | |
hsa-miR-4329 | 1663-1670 | -0.301 | 98.0 | -0.017 | 70.0 | noncon | |
hsa-miR-552-5p | 324-331 | -0.298 | 99.0 | -0.097 | 97.0 | noncon | |
hsa-miR-6794-5p | 1649-1655 | -0.297 | 91.0 | -0.016 | 25.0 | noncon | |
hsa-miR-4716-3p | 1649-1655 | -0.289 | 90.0 | -0.016 | 23.0 | noncon | |
hsa-miR-3926 | 802-809 | -0.288 | 97.0 | -0.016 | 43.0 | noncon | |
hsa-miR-3139 | 1325-1331 | -0.287 | 96.0 | -0.016 | 43.0 | noncon | |
hsa-miR-4529-5p | 1512-1518 | -0.287 | 92.0 | -0.016 | 44.0 | noncon | |
hsa-miR-5694 | 23-29 | -0.286 | 98.0 | -0.286 | 99.0 | noncon | |
hsa-miR-450b-5p | 236-242 | -0.286 | 98.0 | -0.251 | 98.0 | noncon | |
hsa-miR-3921 | 1726-1732 | -0.286 | 97.0 | -0.015 | 54.0 | noncon | |
hsa-miR-6811-5p | 650-656 | -0.284 | 95.0 | -0.016 | 53.0 | noncon | |
hsa-miR-1301-3p | 734-741 | -0.281 | 96.0 | -0.016 | 47.0 | noncon | |
hsa-miR-4328 | 549-556 | -0.278 | 98.0 | -0.015 | 63.0 | noncon | |
hsa-miR-16-1-3p | 434-441 | -0.277 | 97.0 | -0.015 | 56.0 | noncon | |
hsa-miR-708-5p | 1325-1331 | -0.277 | 96.0 | -0.015 | 43.0 | noncon | |
hsa-miR-3911 | 129-135 | -0.274 | 95.0 | -0.274 | 96.0 | noncon | |
hsa-miR-5047 | 734-741 | -0.273 | 95.0 | -0.015 | 48.0 | noncon | |
hsa-miR-30d-3p | 552-559 | -0.27 | 98.0 | -0.015 | 67.0 | noncon | |
hsa-miR-6750-5p | 419-425 | -0.27 | 97.0 | -0.021 | 70.0 | noncon | |
hsa-miR-6822-5p | 419-425 | -0.27 | 97.0 | -0.021 | 70.0 | noncon | |
hsa-miR-1261 | 73-79 | -0.27 | 95.0 | -0.27 | 96.0 | noncon | |
hsa-miR-30a-3p | 552-559 | -0.27 | 98.0 | -0.015 | 67.0 | noncon | |
hsa-miR-30e-3p | 552-559 | -0.27 | 98.0 | -0.015 | 67.0 | noncon | |
hsa-miR-28-5p | 1325-1331 | -0.266 | 95.0 | -0.015 | 42.0 | noncon | |
hsa-miR-125b-5p | 1540-1546 | -0.266 | 94.0 | -0.015 | 45.0 | noncon | |
hsa-miR-4423-3p | 675-681 | -0.265 | 93.0 | -0.015 | 45.0 | noncon | |
hsa-miR-190b | 70-76 | -0.264 | 93.0 | -0.264 | 96.0 | noncon | |
hsa-miR-190a-5p | 70-76 | -0.264 | 93.0 | -0.264 | 96.0 | noncon | |
hsa-miR-4653-5p | 1726-1732 | -0.264 | 97.0 | -0.014 | 52.0 | noncon | |
hsa-miR-497-3p | 166-172 | -0.263 | 98.0 | -0.232 | 98.0 | noncon | |
hsa-miR-34a-3p | 317-323 | -0.262 | 96.0 | -0.086 | 88.0 | noncon | |
hsa-miR-4633-3p | 1324-1330 | -0.262 | 95.0 | -0.015 | 32.0 | noncon | |
hsa-miR-888-3p | 141-147 | -0.262 | 97.0 | -0.262 | 98.0 | noncon | |
hsa-miR-3668 | 68-74 | -0.259 | 94.0 | -0.259 | 96.0 | noncon | |
hsa-miR-493-5p | 489-496 | -0.254 | 97.0 | -0.014 | 56.0 | noncon |