Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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+ |
|
→ |
|
+ | UDP |
ER | Cis- | Medial- | Trans- | TGN |
---|---|---|---|---|
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B3GAT2/hsa-miR-3665 |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
---|---|---|---|---|---|---|---|---|
5'...CCCAUAAAUA
CACCUGCA
...
3' GCGGCGGGGC GUGGACG A |
8mer | 3739-3746 | -0.444 | 98.0 | -0.424 | 98.0 | noncon | |
5'...GCUGGCCAAA
ACCUGCA
G...
3' GCGGCGGGGCG UGGACG A |
7mer-A1 | 1410-1416 | -0.141 | 73.0 | -0.135 | 80.0 | noncon | |
5'...AAGACUGUUU
ACCUGCA
G...
3' GCGGCGGGGCG UGGACG A |
7mer-A1 | 4297-4303 | -0.11 | 65.0 | -0.106 | 75.0 | noncon |