Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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+ | Ser | → |
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+ | UDP |
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+ | Thr | → |
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+ | UDP |
• GALNT6 may participate in synthesis of oncofetal fibronectin.
ER | Cis- | Medial- | Trans- | TGN |
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GALNT6/hsa-miR-3665 |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
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5'...UCAUCCAAAG
CACCUGCA
...
3' GCGGCGGGGC GUGGACG A |
8mer | 678-685 | -0.268 | 93.0 | -0.268 | 94.0 | noncon | |
5'...UGAUGGCACG
CACCUGCA
...
3' GCGGCGGGGC GUGGACG A |
8mer | 864-871 | -0.11 | 65.0 | -0.11 | 75.0 | noncon |