Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Glycogene class |
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Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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+ |
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→ |
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+ | UDP |
• β4GalT7 transfers galactose from UDP-Gal to Xylβ1-Ser and is involved in the biosynthesis of the linkage between core proteins and glycosaminoglycans.
ER | Cis- | Medial- | Trans- | TGN |
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B4GALT7/hsa-miR-4472 |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
---|---|---|---|---|---|---|---|---|
5'...CCUCUCAUCA
CCCCCAC
U...
3' UUUUGUUGUG GGGGGUG G |
7mer-m8 | 340-346 | -0.294 | 96.0 | -0.292 | 97.0 | noncon | |
5'...AGAGCACAAG
CCCCACA
G...
3' UUUUGUUGUGG GGGGUG G |
7mer-A1 | 463-469 | -0.123 | 76.0 | -0.122 | 82.0 | noncon | |
5'...UUGACCGCCA
CCCCCAC
C...
3' UUUUGUUGUG GGGGGUG G |
7mer-m8 | 1878-1884 | -0.103 | 72.0 | -0.007 | 41.0 | noncon |