Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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Man(6P) | → | Fruc(6P) |
• Mannose phosphate isomerase reversibly converts mannose-6-phosphate into fructose-6-phosphate.
• Involved in sugar nucleotide synthesis pathways.
ER | Cis- | Medial- | Trans- | TGN |
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MPI/hsa-miR-3619-5p |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
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5'...UUCUUUUGCAUGAA
UUUAAACC
...
3' CGACGUGGUCGGAC GGACGAC U |
8mer | 166-173 | -0.395 | 99.0 | -0.395 | 99.0 | noncon | |
5'...AAACCUUUAUCCCA
CAGGAAG
G...
3' CGACGUGGUCGGACG GACGAC U |
6mer | 183-189 | -0.185 | 92.0 | -0.185 | 94.0 | noncon | |
5'...CUGGGCCCGAGGAG
GUGAGGU
U...
3' CGACGUGGUCGGACG GACGAC U |
6mer | 1670-1676 | -0.01 | 36.0 | 0.0 | 36.0 | noncon |