Description: The GlycoEnzDB is a manually curated glycoEnzyme database, primarily focused on humans. It covers 390 enzymes across 28 pathway maps. Facilities are also available to create custom glycosylation reaction pathways using experimental data in SBML format and for pathway simulation
Contacts: Sriram Neelamegham (neel@buffalo.edu), Yusen Zhou (yusenzho@buffalo.edu) or Ted Groth (tgroth@buffalo.edu).
Pathway figs |
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Glycosylation |
Sugar Nucleotide |
Glucuronidation |
Glycan Degradation |
Pathway Map |
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H2O | + |
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→ |
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+ |
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• Removes α(1-2)Glc from the nonreducing terminal end of the α1,3Man branch to produce Glc2Man9GlcNAc2.
ER | Cis- | Medial- | Trans- | TGN |
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MOGS/hsa-miR-509-5p |
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miRNA Target | Site Type | Pos. | Context Score | Frac. | Wt. Context | Frac. | Conserved | Quality |
---|---|---|---|---|---|---|---|---|
5'...GCCCCAACCUCAA
CUGCAGUA
...
3' ACUAACGGUGACA GACGUCA U |
8mer | 1227-1234 | -0.255 | 97.0 | -0.249 | 98.0 | noncon |